Brazil has the world's second-largest cattle herd and second-largest no-till grain crop area. However, these activities are not frequently integrated because there is a widespread perception that cattle have a negative effect on cropping, especially when high crop yields are a goal. This misunderstanding of the synergy between pastures, livestock and crops is linked to overgrazing at the pasture rotation phase, which causes a decline in soil quality. Few studies have investigated the effect of pasture grazing intensities on soil carbon (C) balance and soil quality in subtropical environments. This work assessed the effects of different grazing intensities (0.10, 0.20, 0.30 and 0.40 m sward height) on soil C indices and animal productivity in a clay Haplorthox. The crop-livestock system model was a soybean/ryegrass plus black oat annual rotation managed for 10 years, using a randomized complete block design with three replications. Grazing intensity affected the quantity and composition of soil C input. Under heavy grazing with limited soil C input, there was a decrease in pasture and an increase in soybean participation in total C input. Soil organic C (0-0.20 m) under different grazing intensities had a linear relationship with C stratification ratio, C management index (CMI) and C pool index. Our results suggest that integrated crop-livestock systems could act as atmospheric C sources or sinks, depending on the grazing intensity. Pastures managed at 0.20 and 0.40 m height had the best balance between CMI and animal daily gain. The best balance between CMI and live weight gain per unit area occurred in sward height of 0.20 m.